Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932606.1_cds_XP_016479066.1_70642
CDS Infomation

[gene=LOC107800418] [db_xref=GeneID:107800418] [protein=auxin transporter-like protein 4] [protein_id=XP_016479066.1] [location=complement(join(4041..4283,5205..5670,6267..6364,6485..6668,7205..7317,7497..7682,8096..8269))] [gbkey=CDS]
Sequence

ATGTATTCTGAGAAGCAAGGAGAAAAAGCAATTGTCTCAAACTTTAATGAAACTGATCAT
GAAGATGGAGAAGTTGAGAAATCAGAAGAAGATCAGTCCATTTTCAGTGTCAAAAGTCTC
CTTTGGCATGGTGGTTCTGTTTGGGATGCTTGGTTCAGTTGTGCTTCTAATCAAGTAGCT
CAAGTGTTGTTGACACTACCATATTCTTTTTCCCAACTTGGTATGGTATCAGGAATAGTG
CTACAAGTGTTCTATGGTATTGTTGGGAGCTGGACTGCATACCTTATCAGTGTTCTTTAC
ATAGAGTACAGAAGTAGAAAAGAAAAAGAAGGCGTTAGCTTTAAAAATCATGTCATTCAG
TGGTTTGAAGTGCTAGATGGACTACTGGGTCCTTATTGGAAAGCAGTGGGACTTGCCTTC
AACTGTACCTTCCTTTTGTTTGGATCTGTCATTCAACTTATTGCTTGCGCAAGTAATATA
TATTATATCAATGACCATTTAGACAAGAGGACATGGACATACATATTTGGAGCTTGTTGT
GCTACCACTGTTTTTATTCCTTCTTTCCATAACTACCGGATTTGGTCTTTCCTTGGCCTT
GGGATGACCACTTACACAGCATGGTACTTAACTATTGCTGCTGTTCTTCATGGCCAGGTT
GAAAATGTACAACACTCTGCTCCAGCAAAGCTTGTGCTGTATTTCACTGGTGCCACCAAT
ATTCTTTACACCTTTGGTGGACACGCTGTTACTGTGGAAATTATGCATGCAATGTGGAAA
CCCCAGAAGTTCAAATACATTTATTTAATAGCCACACTCTACGTTTTCACCCTAACCATT
CCATCAGCTTCAGCTGTCTACTGGGCATTTGGTGATCAGCTTTTAAACCACAGTAACGCA
TTTTCACTTCTGCCCAAAGACGGATGGCGCGACGCAGCTGTTATTTTAATGCTAATTCAC
CAGTTTATCACATTTGGATTTGCATGTACACCATTGTACTTTGTGTGGGAGAAGGTGATA
GGAATGCATGACACAAAGAGTATATGCTTAAGGGCATTGGTTAGGTTGCCTGTGGTGATA
CCTATATGGTTCTTGGCTATTATTTTCCCATTTTTTGGCCCTATTAACTCTGCAGTTGGG
GCTCTTTTGGTTAGTTTCACAGTCTACATCATTCCAGCTCTTGCCCATATGCTCACTTAT
AGAACAGCTTCTGCTCGACAGAATGCGGCGGAGAAGCCACCATCTTTCATGCCAAGCTGG
ACTGTAATGTACGTCATTAACATATTTATAGTGGGTTGGTGTTTAGTCGTTGGGTTTGGA
TTTGGAGGATGGGCTAGCATGACCAATTTTATCAAACAAGTTGATACATTTGGCCTTTTT
GCAAAATGTTATCAGTGCAAACCTGCAGTTCCTCCGGCAAGTCTACCACCACGTCCGGCG
CCTAACGCCACCGTGCACCACTAG

Peptide Sequence

PEP ID

XP_016479066.1
PEP Infomation

PREDICTED: auxin transporter-like protein 4 [Nicotiana tabacum]
Sequence

MYSEKQGEKAIVSNFNETDHEDGEVEKSEEDQSIFSVKSLLWHGGSVWDAWFSCASNQVA
QVLLTLPYSFSQLGMVSGIVLQVFYGIVGSWTAYLISVLYIEYRSRKEKEGVSFKNHVIQ
WFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACC
ATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVLHGQVENVQHSAPAKLVLYFTGATN
ILYTFGGHAVTVEIMHAMWKPQKFKYIYLIATLYVFTLTIPSASAVYWAFGDQLLNHSNA
FSLLPKDGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALVRLPVVI
PIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRTASARQNAAEKPPSFMPSW
TVMYVINIFIVGWCLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCKPAVPPASLPPRPA
PNATVHH

Transcript Sequence

Gene sequence data has not been registered.